Claude Desktop
Desktop · Freemium · Proprietary
Anthropic's official Claude AI desktop application. Supports MCP servers to extend functionality.
WindowsMacOS
Research & Data · Search Tools
pubmed
JackKuo666/PubMed-MCP-Server
Enable AI assistants to search, access, and analyze PubMed articles through a simple MCP interface.
Install
npx -y @smithery/cli install @JackKuo666/pubmed-mcp-server --client claudeClient configuration
{
"mcpServers": {
"pubmed": {
"command": "python",
"args": [
"-m",
"pubmed-mcp-server"
]
}
}
}- GitHub stars
- 9
- Author
- @JackKuo666
- Category
- Research & Data, Search Tools
- License
- MIT
- Updated
- Oct 6, 2026
About pubmed
The PubMed MCP Server provides a bridge between AI assistants and PubMed's vast repository of biomedical literature through the Model Context Protocol (MCP). It allows AI models to search for scientific articles, access their metadata, and perform deep analysis in a programmatic way.
Features
Paper Search: Query PubMed articles with keywords or advanced search
Efficient Retrieval: Fast access to paper metadata
Metadata Access: Retrieve detailed metadata for specific papers
Research Support: Facilitate biomedical sciences research and analysis
Paper Access: Attempt to download full-text PDF content
Deep Analysis: Perform comprehensive analysis of papers
Research Prompts: A set of specialized prompts for paper analysis
Tools (5)
search_pubmed_key_words
Search for articles on PubMed using keywords.
search_pubmed_advanced
Perform an advanced search for articles on PubMed with multiple parameters.
get_pubmed_article_metadata
Fetch metadata for a PubMed article using its PMID.
download_pubmed_pdf
Attempt to download the full-text PDF for a PubMed article.
deep_paper_analysis
Perform a comprehensive analysis of a PubMed article.
Details on this page are taken from the project's README. Open README
Supported clients
Clients mentioned in this server's README:
Cline
Desktop · Free · MIT
An AI coding assistant integrated into the IDE. Supports MCP servers for enhanced functionality.
Cursor
Desktop · Freemium · Proprietary
The first agentic IDE. The Cursor editor truly merges how developers and AI work together, delivering a magical coding experience.
Windsurf
Desktop · Freemium · Proprietary
The first agentic IDE. The Windsurf editor truly merges how developers and AI work together.
Related MCP servers
Firecrawl MCP Server
mendableai/firecrawl-mcp-server
A Model Context Protocol (MCP) server that brings Firecrawl to MCP-compatible AI agents — search, scrape, and interact with the live web for clean, agent-ready context.
Exa Web Search
exa-labs/exa-mcp-server
Connect AI agents to Exa for web search, content fetching, and multi-step research.
ArXiv
blazickjp/arxiv-mcp-server
A local MCP server for agent literature work. The differentiator is original-LaTeX section reads, BibTeX from arXiv metadata, and topic watches. Papers stay on disk.
sail
lakehq/sail
Sail is a drop-in Apache Spark replacement written in Rust, unifying batch processing, stream processing, and compute-intensive AI workloads on a distributed, multimodal compute engine.
OpenAPI Proxy
janwilmake/openapi-mcp-server
A Model Context Protocol (MCP) server for Claude/Cursor that enables searching and exploring OpenAPI specifications through oapis.org.
Excel MCP Server
haris-musa/excel-mcp-server
A Model Context Protocol server that lets AI assistants create, read and edit Excel workbooks. It needs no Microsoft Excel installation.