
Claude Desktop
Desktop · Freemium · Proprietary
Anthropic's official Claude AI desktop application. Supports MCP servers to extend functionality.
Research & Data · Search Tools

JackKuo666/bioRxiv-MCP-Server
Enable AI assistants to search and access bioRxiv papers through a simple MCP interface.
npx -y @smithery/cli@latest install @JackKuo666/biorxiv-mcp-server --client claude{
"mcpServers": {
"biorxiv": {
"command": "python",
"args": [
"-m",
"biorxiv-mcp-server"
]
}
}
}The bioRxiv MCP Server provides a bridge between AI assistants and bioRxiv's preprint repository through the Model Context Protocol (MCP). It allows AI models to search for biology preprints and access their metadata in a programmatic way.
Paper Search: Query bioRxiv papers with keywords or advanced search
Efficient Retrieval: Fast access to paper metadata
Metadata Access: Retrieve detailed metadata for specific papers
Research Support: Facilitate biological sciences research and analysis
Paper Access: Download and read paper content
Paper Listing: View all downloaded papers
Local Storage: Papers are saved locally for faster access
Research Prompts: A set of specialized prompts for paper analysis
search_biorxiv_key_words
Search for articles on bioRxiv using keywords.
search_biorxiv_advanced
Perform an advanced search for articles on bioRxiv with multiple parameters.
get_biorxiv_metadata
Fetch metadata for a bioRxiv article using its DOI.
Details on this page are taken from the project's README. Open README
Clients mentioned in this server's README:

Desktop · Freemium · Proprietary
Anthropic's official Claude AI desktop application. Supports MCP servers to extend functionality.

Desktop · Free · MIT
An AI coding assistant integrated into the IDE. Supports MCP servers for enhanced functionality.

Desktop · Freemium · Proprietary
The first agentic IDE. The Cursor editor truly merges how developers and AI work together, delivering a magical coding experience.

Desktop · Freemium · Proprietary
The first agentic IDE. The Windsurf editor truly merges how developers and AI work together.

mendableai/firecrawl-mcp-server
A Model Context Protocol (MCP) server that brings Firecrawl to MCP-compatible AI agents — search, scrape, and interact with the live web for clean, agent-ready context.

exa-labs/exa-mcp-server
Connect AI agents to Exa for web search, content fetching, and multi-step research.

blazickjp/arxiv-mcp-server
A local MCP server for agent literature work. The differentiator is original-LaTeX section reads, BibTeX from arXiv metadata, and topic watches. Papers stay on disk.

lakehq/sail
Sail is a drop-in Apache Spark replacement written in Rust, unifying batch processing, stream processing, and compute-intensive AI workloads on a distributed, multimodal compute engine.
janwilmake/openapi-mcp-server
A Model Context Protocol (MCP) server for Claude/Cursor that enables searching and exploring OpenAPI specifications through oapis.org.

haris-musa/excel-mcp-server
A Model Context Protocol server that lets AI assistants create, read and edit Excel workbooks. It needs no Microsoft Excel installation.