Claude Desktop
Desktop · Freemium · Proprietary
Anthropic's official Claude AI desktop application. Supports MCP servers to extend functionality.
WindowsMacOS
Research & Data · Developer Tools
Molecule Visualization (ChimeraX, PyMOL)
chatmol/molecule-mcp
Molecule-MCP: A model-context-protocol server for molecules. Molecule-MCP connects molecule science releated tools to Claude AI through the Model Context Protocol (MCP), allowing Claude to directly interact with and control these tools and act as a co-scientist. This integration enables prompt assisted molecule modeling.
Install
Client configuration
{
"mcpServers": {
"pymol": {
"command": "/path/to/mcp",
"args": [
"run",
"/path/to/molecule-mcp/pymol_server.py"
]
}
}
}- GitHub stars
- 69
- Author
- @chatmol
- Category
- Research & Data, Developer Tools
- Updated
- Oct 6, 2026
Details on this page are taken from the project's README. Open README
Supported clients
Clients mentioned in this server's README:
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